M&A Deals, Mismatches Raise Red Flags: 1.6 Lakh ITRs Under Tax Lens

Under I-T Lens 1.6 Lakh Tax Returns Under Scrutiny

The Income Tax Department has intensified its scrutiny of 1.6 lakh tax returns in FY 2023โ€“24. The focus? High-value transactions and mismatch in disclosures โ€” especially involving M&A discrepancies, foreign assets, and business reorganisations.

Letโ€™s break it down and help you stay compliant.


Why Are Tax Returns Under Scrutiny?

According to sources cited in Economic Times and CBDT disclosures:

  • 1.6 lakh returns flagged using AI-driven risk assessment tools
  • 60,000 notices already issued
  • Focus sectors include:
    • Mergers & Acquisitions (M&A)
    • Foreign transactions
    • High net-worth individuals (HNIs)
    • Startups and reorganised entities

M&A Discrepancies: Whatโ€™s the Problem?

The CBDT is closely examining inconsistencies in merger/demerger transactions under:

  • Section 47 โ€“ Exempt transfers in business reorganisation
  • Section 56(2)(viib) โ€“ Valuation issues under angel tax rules
  • Form 3CA/3CB mismatches โ€“ Audit reports showing capital changes not reflected in ITR
  • Improper disclosures under Schedule SH-1 (Shareholding) and Schedule PTI

Common Red Flags in M&A Deals

Issue DetectedLegal Reference
Capital gains not reportedSec 47 read with Sec 45
Share premium undervaluationSec 56(2)(viib) & Rule 11UA
Assets transferred without considerationPotential Sec 28(iv) trigger
Lack of reporting in Form 10B/10BB (audit)Rule 12AB for prescribed reporting

How to Avoid Red Flags in Your ITR

If your company went through a merger, acquisition or restructuring, follow these best practices:

  • Disclose full transaction details in applicable ITR schedules
  • File audit reports accurately under Form 3CD or 10B
  • Use correct fair market valuation (FMV) rules under Rule 11U and 11UA
  • Avoid inconsistency between ITR and MCA filings (e.g., Form INC-28, MGT-7)
  • If foreign investment is involved, reconcile with FEMA and RBI filings

Expert Tip: Keep Valuation Notes Handy

“The I-T Department is increasingly demanding valuation reports and board approvals during scrutiny. Keep all documentation ready โ€” especially when claiming exemptions under Section 47 or FMV-based filings under 56(2)(viib).”
โ€” Rakesh B., Chartered Accountant & M&A Advisor


Legal Reference: Notices & Compliance

  • CBDT systems use risk-based scrutiny under CASS (Computer Aided Scrutiny Selection)
  • Refer to CBDT’s Scrutiny Guidelines for AY 2024โ€“25
  • Notices issued under:
    • Section 143(2) โ€“ Regular assessment
    • Section 148A โ€“ Income escaping assessment
    • Section 139(9) โ€“ Defective return

Mobile-Friendly Summary (Snippet Use)

1.6 lakh ITRs flagged by CBDT for scrutiny in FY 2023โ€“24. Mergers, acquisitions, and capital mismatch disclosures top the red flag list. Ensure proper reporting, FMV calculation, and audit linkage to stay compliant.


FAQs: Tax Scrutiny for M&A Transactions

Q1. I sold shares during a merger. Do I pay capital gains tax?
If the merger qualifies under Section 47, it may be tax-exempt โ€” provided all conditions are met.

Q2. I received a scrutiny notice under Sec 143(2). What now?
You must respond within the deadline through your income tax e-filing account with full documentation.

Q3. Can past ITR mismatches lead to notices?
Yes, especially under Section 148A if income has escaped assessment.


๐Ÿ”— Related:


Final Thoughts: Stay Transparent, Stay Safe

If your entity underwent business restructuring, mergers, or foreign-funded expansion, your return is more likely to attract scrutiny. Ensure professional audit, accurate ITR filings, and clear valuation proof.

Need help decoding your ITR or responding to notices?

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